Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Gm43347-201ENSMUST00000200226 580 ntBASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Birc2-201ENSMUST00000054878 378 ntBASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc58Q8R3Q6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Gm6376-201ENSMUST00000209407 580 ntBASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc58Q8R3Q6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms