Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Mir5126-201ENSMUST00000175513 77 ntBASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slf1Q8R3P9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.16□□□□□ -0.14
Slf1Q8R3P9 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slf1Q8R3P9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slf1Q8R3P9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Slf1Q8R3P9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.15□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms