Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Atf7Q8R0S1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf7Q8R0S1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Gm29741-201ENSMUST00000192667 421 ntBASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Gm46209-201ENSMUST00000217912 553 ntBASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf7Q8R0S1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gm15460-201ENSMUST00000118147 391 ntBASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gm13616-201ENSMUST00000120600 222 ntBASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gm38294-201ENSMUST00000192831 381 ntBASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Gm9229-201ENSMUST00000222777 126 ntBASIC16.53■□□□□ 0.24
Atf7Q8R0S1 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Atf7Q8R0S1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms