Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf4Q8K4J2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Ebf4Q8K4J2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf4Q8K4J2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf4Q8K4J2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf4Q8K4J2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf4Q8K4J2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf4Q8K4J2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Gm9182-201ENSMUST00000217829 639 ntBASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf4Q8K4J2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Gm14859-201ENSMUST00000117752 357 ntBASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Gm12644-201ENSMUST00000119935 606 ntBASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.76□□□□□ -0.37
Ebf4Q8K4J2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf4Q8K4J2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms