Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.82□□□□□ -0.2
Vps50Q8CI71 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm22065-201ENSMUST00000103753 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm22066-201ENSMUST00000103761 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm24932-201ENSMUST00000103763 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm24115-201ENSMUST00000103799 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm22190-201ENSMUST00000103827 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm22191-201ENSMUST00000103831 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm24721-201ENSMUST00000103849 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm28018-201ENSMUST00000103869 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm26399-201ENSMUST00000103937 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Mir449b-201ENSMUST00000104833 80 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm25349-201ENSMUST00000177728 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm23616-201ENSMUST00000177797 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm25871-201ENSMUST00000177816 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm24752-201ENSMUST00000178240 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm24496-201ENSMUST00000178287 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm25649-201ENSMUST00000178476 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm25548-201ENSMUST00000178681 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm23147-201ENSMUST00000178841 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm26095-201ENSMUST00000179270 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm22171-201ENSMUST00000179283 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm23936-201ENSMUST00000179354 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm22619-201ENSMUST00000179516 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm25255-201ENSMUST00000179579 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm24755-201ENSMUST00000179691 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm26506-201ENSMUST00000179692 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm25086-201ENSMUST00000179931 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm23243-201ENSMUST00000180047 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm24659-201ENSMUST00000180212 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm24169-201ENSMUST00000180244 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm23689-201ENSMUST00000180354 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm27359-201ENSMUST00000184153 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm27785-201ENSMUST00000184268 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm27466-201ENSMUST00000184396 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm27703-201ENSMUST00000184836 110 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps50Q8CI71 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps50Q8CI71 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.82□□□□□ -0.2
Vps50Q8CI71 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.81□□□□□ -0.2
Vps50Q8CI71 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.81□□□□□ -0.2
Vps50Q8CI71 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.81□□□□□ -0.2
Vps50Q8CI71 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps50Q8CI71 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms