Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Gm8410-201ENSMUST00000117225 605 ntBASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Sh3rf3Q8C120 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 AA619741-201ENSMUST00000195095 646 ntBASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Gm16476-201ENSMUST00000221544 139 ntBASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sh3rf3Q8C120 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Gm24543-201ENSMUST00000103867 82 ntBASIC14.61□□□□□ -0.07
Sh3rf3Q8C120 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms