Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd9Q8BYH8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd9Q8BYH8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.9□□□□□ -0.67
Chd9Q8BYH8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Chd9Q8BYH8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Gm19640-201ENSMUST00000214849 464 ntBASIC10.89□□□□□ -0.67
Chd9Q8BYH8 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Gm24830-201ENSMUST00000102024 166 ntBASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Gm6152-201ENSMUST00000151704 340 ntBASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.89□□□□□ -0.67
Chd9Q8BYH8 Gm25890-201ENSMUST00000177643 165 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms