Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trerf1Q8BXJ2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trerf1Q8BXJ2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trerf1Q8BXJ2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm22065-201ENSMUST00000103753 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm22066-201ENSMUST00000103761 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm24932-201ENSMUST00000103763 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm24115-201ENSMUST00000103799 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm22190-201ENSMUST00000103827 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm22191-201ENSMUST00000103831 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm24721-201ENSMUST00000103849 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm28018-201ENSMUST00000103869 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm26399-201ENSMUST00000103937 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm2810-201ENSMUST00000118681 990 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm15920-201ENSMUST00000118998 402 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm25349-201ENSMUST00000177728 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm23616-201ENSMUST00000177797 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm25871-201ENSMUST00000177816 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm24752-201ENSMUST00000178240 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm24496-201ENSMUST00000178287 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm25649-201ENSMUST00000178476 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm25548-201ENSMUST00000178681 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm23147-201ENSMUST00000178841 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm26095-201ENSMUST00000179270 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm22171-201ENSMUST00000179283 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm23936-201ENSMUST00000179354 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm22619-201ENSMUST00000179516 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm25255-201ENSMUST00000179579 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm24755-201ENSMUST00000179691 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm26506-201ENSMUST00000179692 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm25086-201ENSMUST00000179931 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm23243-201ENSMUST00000180047 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm24659-201ENSMUST00000180212 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm24169-201ENSMUST00000180244 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm23689-201ENSMUST00000180354 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm27359-201ENSMUST00000184153 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm27785-201ENSMUST00000184268 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm27466-201ENSMUST00000184396 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm27703-201ENSMUST00000184836 110 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trerf1Q8BXJ2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Trerf1Q8BXJ2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trerf1Q8BXJ2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms