Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Mir6392-201ENSMUST00000184924 108 ntBASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Gm6745-201ENSMUST00000199216 526 ntBASIC14.12□□□□□ -0.15
Ubr7Q8BU04 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Gm19078-201ENSMUST00000206311 727 ntBASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ubr7Q8BU04 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Gm2445-201ENSMUST00000182798 989 ntBASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Mir7654-201ENSMUST00000185082 70 ntBASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Gm43094-201ENSMUST00000196549 921 ntBASIC14.11□□□□□ -0.15
Ubr7Q8BU04 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubr7Q8BU04 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Gm15678-201ENSMUST00000117573 960 ntBASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Gm15376-201ENSMUST00000122258 783 ntBASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Gm9908-201ENSMUST00000211534 448 ntBASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Gm7653-201ENSMUST00000214567 508 ntBASIC14.1□□□□□ -0.15
Ubr7Q8BU04 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubr7Q8BU04 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms