Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm7488-201ENSMUST00000117148 684 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm13385-201ENSMUST00000121089 220 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm8927-201ENSMUST00000181978 981 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm42612-201ENSMUST00000197986 623 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm43170-201ENSMUST00000199827 612 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Gm3222-201ENSMUST00000071282 990 ntBASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup54Q8BTS4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Nup54Q8BTS4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup54Q8BTS4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nup54Q8BTS4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup54Q8BTS4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Nup54Q8BTS4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup54Q8BTS4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup54Q8BTS4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Gm15240-201ENSMUST00000118156 720 ntBASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Nup54Q8BTS4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Gm28760-201ENSMUST00000185995 736 ntBASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup54Q8BTS4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms