Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Gm6983-201ENSMUST00000214912 628 ntBASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Usp6nlQ80XC3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Gm27731-201ENSMUST00000185192 107 ntBASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Mir497b-201ENSMUST00000093601 125 ntBASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Usp6nlQ80XC3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Gm8062-201ENSMUST00000139696 444 ntBASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Gm24196-201ENSMUST00000179161 110 ntBASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Gm42693-201ENSMUST00000196779 631 ntBASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms