Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.39□□□□□ -0.27
Vrk1Q80X41 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.39□□□□□ -0.27
Vrk1Q80X41 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.39□□□□□ -0.27
Vrk1Q80X41 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.39□□□□□ -0.27
Vrk1Q80X41 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Mir7654-201ENSMUST00000185082 70 ntBASIC13.39□□□□□ -0.27
Vrk1Q80X41 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.39□□□□□ -0.27
Vrk1Q80X41 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.39□□□□□ -0.27
Vrk1Q80X41 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.39□□□□□ -0.27
Vrk1Q80X41 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Vrk1Q80X41 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Gm15678-201ENSMUST00000117573 960 ntBASIC13.38□□□□□ -0.27
Vrk1Q80X41 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Mir7085-201ENSMUST00000184353 66 ntBASIC13.38□□□□□ -0.27
Vrk1Q80X41 Gm5035-201ENSMUST00000215581 927 ntBASIC13.38□□□□□ -0.27
Vrk1Q80X41 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.38□□□□□ -0.27
Vrk1Q80X41 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vrk1Q80X41 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Gm18307-201ENSMUST00000206864 949 ntBASIC13.37□□□□□ -0.27
Vrk1Q80X41 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.37□□□□□ -0.27
Vrk1Q80X41 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vrk1Q80X41 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms