Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Gm9797-201ENSMUST00000052902 613 ntBASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38bQ80SY5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Gm43179-201ENSMUST00000198797 275 ntBASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.67□□□□□ -0.06
Prpf38bQ80SY5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms