Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Gm42550-201ENSMUST00000201553 960 ntBASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Snrnp40Q6PE01 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.27□□□□□ -0.44
Snrnp40Q6PE01 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Gm8810-201ENSMUST00000172895 754 ntBASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Snrnp40Q6PE01 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Gm14723-201ENSMUST00000118686 215 ntBASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Gm6152-201ENSMUST00000151704 340 ntBASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Gm8598-201ENSMUST00000221184 836 ntBASIC12.26□□□□□ -0.45
Snrnp40Q6PE01 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms