Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gli3Q61602 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gli3Q61602 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC18.47■□□□□ 0.55
Gli3Q61602 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC18.47■□□□□ 0.55
Gli3Q61602 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Gli3Q61602 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gli3Q61602 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gli3Q61602 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gli3Q61602 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Gli3Q61602 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gli3Q61602 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gli3Q61602 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gli3Q61602 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.46■□□□□ 0.55
Gli3Q61602 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gli3Q61602 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gli3Q61602 Gm2546-201ENSMUST00000182630 991 ntBASIC18.46■□□□□ 0.55
Gli3Q61602 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC18.46■□□□□ 0.55
Gli3Q61602 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gli3Q61602 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
Gli3Q61602 AC123665.1-201ENSMUST00000228204 438 ntBASIC18.46■□□□□ 0.55
Gli3Q61602 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC18.45■□□□□ 0.54
Gli3Q61602 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Gm13045-201ENSMUST00000119019 712 ntBASIC18.45■□□□□ 0.54
Gli3Q61602 Gm12286-201ENSMUST00000119246 1002 ntBASIC18.45■□□□□ 0.54
Gli3Q61602 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC18.45■□□□□ 0.54
Gli3Q61602 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC18.45■□□□□ 0.54
Gli3Q61602 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC18.45■□□□□ 0.54
Gli3Q61602 Gm3096-201ENSMUST00000185770 364 ntBASIC18.45■□□□□ 0.54
Gli3Q61602 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC18.45■□□□□ 0.54
Gli3Q61602 Gm7848-201ENSMUST00000210739 718 ntBASIC18.45■□□□□ 0.54
Gli3Q61602 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Gli3Q61602 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Gli3Q61602 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC18.45■□□□□ 0.54
Gli3Q61602 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Gm15897-201ENSMUST00000117770 1486 ntBASIC18.45■□□□□ 0.54
Gli3Q61602 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gli3Q61602 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.44■□□□□ 0.54
Gli3Q61602 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Gli3Q61602 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gli3Q61602 Carlr-201ENSMUST00000181515 2574 ntBASIC18.44■□□□□ 0.54
Gli3Q61602 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Gli3Q61602 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC18.44■□□□□ 0.54
Gli3Q61602 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC18.44■□□□□ 0.54
Gli3Q61602 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.44■□□□□ 0.54
Gli3Q61602 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Gm5597-201ENSMUST00000182353 1193 ntBASIC18.44■□□□□ 0.54
Gli3Q61602 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Gli3Q61602 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Gm25517-201ENSMUST00000083865 134 ntBASIC18.44■□□□□ 0.54
Gli3Q61602 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gli3Q61602 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gli3Q61602 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gli3Q61602 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC18.43■□□□□ 0.54
Gli3Q61602 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC18.43■□□□□ 0.54
Gli3Q61602 AC124457.1-201ENSMUST00000198845 120 ntBASIC18.43■□□□□ 0.54
Gli3Q61602 AC173210.1-201ENSMUST00000222341 1131 ntBASIC18.43■□□□□ 0.54
Gli3Q61602 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 Gm43908-201ENSMUST00000205074 1472 ntBASIC18.43■□□□□ 0.54
Gli3Q61602 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gli3Q61602 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms