Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.81■□□□□ 0.28
Mre11Q61216 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.81■□□□□ 0.28
Mre11Q61216 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Mre11Q61216 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.81■□□□□ 0.28
Mre11Q61216 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mre11Q61216 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Mre11Q61216 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Mre11Q61216 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.8■□□□□ 0.28
Mre11Q61216 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.8■□□□□ 0.28
Mre11Q61216 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Ank2-226ENSMUST00000189368 339 ntBASIC16.8■□□□□ 0.28
Mre11Q61216 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 AC154634.3-201ENSMUST00000224589 736 ntBASIC16.8■□□□□ 0.28
Mre11Q61216 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Mre11Q61216 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Mre11Q61216 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mre11Q61216 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Mre11Q61216 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Mre11Q61216 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.79■□□□□ 0.28
Mre11Q61216 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.79■□□□□ 0.28
Mre11Q61216 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.79■□□□□ 0.28
Mre11Q61216 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.79■□□□□ 0.28
Mre11Q61216 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mre11Q61216 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mre11Q61216 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.79■□□□□ 0.28
Mre11Q61216 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mre11Q61216 Gm45743-201ENSMUST00000212701 2795 ntBASIC16.78■□□□□ 0.28
Mre11Q61216 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mre11Q61216 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.78■□□□□ 0.28
Mre11Q61216 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.78■□□□□ 0.28
Mre11Q61216 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.78■□□□□ 0.28
Mre11Q61216 Gm45747-201ENSMUST00000212203 999 ntBASIC16.78■□□□□ 0.28
Mre11Q61216 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.78■□□□□ 0.28
Mre11Q61216 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Mre11Q61216 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mre11Q61216 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mre11Q61216 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms