Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Slc6a4Q60857 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Mir6392-201ENSMUST00000184924 108 ntBASIC14.34□□□□□ -0.11
Slc6a4Q60857 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Gm19220-201ENSMUST00000222682 803 ntBASIC14.34□□□□□ -0.11
Slc6a4Q60857 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.34□□□□□ -0.11
Slc6a4Q60857 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.34□□□□□ -0.11
Slc6a4Q60857 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Slc6a4Q60857 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slc6a4Q60857 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slc6a4Q60857 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Slc6a4Q60857 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Slc6a4Q60857 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Slc6a4Q60857 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.33□□□□□ -0.12
Slc6a4Q60857 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Slc6a4Q60857 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Gm12341-201ENSMUST00000119724 503 ntBASIC14.33□□□□□ -0.12
Slc6a4Q60857 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Gm18905-201ENSMUST00000205454 928 ntBASIC14.33□□□□□ -0.12
Slc6a4Q60857 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.33□□□□□ -0.12
Slc6a4Q60857 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.33□□□□□ -0.12
Slc6a4Q60857 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.32□□□□□ -0.12
Slc6a4Q60857 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.32□□□□□ -0.12
Slc6a4Q60857 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.32□□□□□ -0.12
Slc6a4Q60857 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.32□□□□□ -0.12
Slc6a4Q60857 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.32□□□□□ -0.12
Slc6a4Q60857 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Slc6a4Q60857 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms