Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Gm9257-201ENSMUST00000221254 232 ntBASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx49Q4FZF3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Gm29127-201ENSMUST00000188304 517 ntBASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Gm43179-201ENSMUST00000198797 275 ntBASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx49Q4FZF3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Ddx49Q4FZF3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms