Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lins1Q3U1D0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Gm17150-201ENSMUST00000165577 381 ntBASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Gm5425-201ENSMUST00000214125 459 ntBASIC16.65■□□□□ 0.26
Lins1Q3U1D0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lins1Q3U1D0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Lins1Q3U1D0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Lins1Q3U1D0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lins1Q3U1D0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Mir7085-201ENSMUST00000184353 66 ntBASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Gm5035-201ENSMUST00000215581 927 ntBASIC16.63■□□□□ 0.25
Lins1Q3U1D0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lins1Q3U1D0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lins1Q3U1D0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lins1Q3U1D0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lins1Q3U1D0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lins1Q3U1D0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Lins1Q3U1D0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lins1Q3U1D0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms