Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm7848-201ENSMUST00000210739 718 ntBASIC12.41□□□□□ -0.42
Chd8Q09XV5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chd8Q09XV5 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm15957-201ENSMUST00000118893 974 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm8927-201ENSMUST00000181978 981 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm42550-201ENSMUST00000201553 960 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Gm45550-201ENSMUST00000209380 946 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Mir483-201ENSMUST00000093631 73 ntBASIC12.4□□□□□ -0.42
Chd8Q09XV5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chd8Q09XV5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Chd8Q09XV5 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.4□□□□□ -0.43
Chd8Q09XV5 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.4□□□□□ -0.43
Chd8Q09XV5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Chd8Q09XV5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Chd8Q09XV5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Gm3096-201ENSMUST00000185770 364 ntBASIC12.39□□□□□ -0.43
Chd8Q09XV5 Olfr286-202ENSMUST00000205305 969 ntBASIC12.39□□□□□ -0.43
Chd8Q09XV5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.39□□□□□ -0.43
Chd8Q09XV5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd8Q09XV5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chd8Q09XV5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms