Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox4Q06831 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Sox4Q06831 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.78□□□□□ -0.2
Sox4Q06831 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox4Q06831 Gm24694-201ENSMUST00000180054 110 ntBASIC13.78□□□□□ -0.2
Sox4Q06831 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.78□□□□□ -0.2
Sox4Q06831 Gm27663-201ENSMUST00000184839 110 ntBASIC13.78□□□□□ -0.2
Sox4Q06831 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox4Q06831 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox4Q06831 Gm2423-201ENSMUST00000074863 733 ntBASIC13.78□□□□□ -0.2
Sox4Q06831 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox4Q06831 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Sox4Q06831 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox4Q06831 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Sox4Q06831 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sox4Q06831 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox4Q06831 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Sox4Q06831 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.77□□□□□ -0.2
Sox4Q06831 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Sox4Q06831 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox4Q06831 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Sox4Q06831 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Sox4Q06831 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Sox4Q06831 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Sox4Q06831 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Sox4Q06831 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox4Q06831 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sox4Q06831 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox4Q06831 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sox4Q06831 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox4Q06831 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox4Q06831 Gm7730-201ENSMUST00000212486 454 ntBASIC13.77□□□□□ -0.21
Sox4Q06831 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.77□□□□□ -0.21
Sox4Q06831 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox4Q06831 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sox4Q06831 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox4Q06831 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sox4Q06831 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Sox4Q06831 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Sox4Q06831 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox4Q06831 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.76□□□□□ -0.21
Sox4Q06831 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.76□□□□□ -0.21
Sox4Q06831 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.76□□□□□ -0.21
Sox4Q06831 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sox4Q06831 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.76□□□□□ -0.21
Sox4Q06831 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.76□□□□□ -0.21
Sox4Q06831 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.76□□□□□ -0.21
Sox4Q06831 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.76□□□□□ -0.21
Sox4Q06831 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.76□□□□□ -0.21
Sox4Q06831 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms