Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Gm4804-201ENSMUST00000182234 999 ntBASIC13.99□□□□□ -0.17
Col6a2Q02788 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.99□□□□□ -0.17
Col6a2Q02788 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.99□□□□□ -0.17
Col6a2Q02788 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.99□□□□□ -0.17
Col6a2Q02788 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a2Q02788 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.99□□□□□ -0.17
Col6a2Q02788 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col6a2Q02788 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.98□□□□□ -0.17
Col6a2Q02788 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a2Q02788 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col6a2Q02788 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Col6a2Q02788 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.97□□□□□ -0.17
Col6a2Q02788 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Gm23984-201ENSMUST00000157139 203 ntBASIC13.97□□□□□ -0.17
Col6a2Q02788 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Gm17795-201ENSMUST00000214505 757 ntBASIC13.97□□□□□ -0.17
Col6a2Q02788 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.97□□□□□ -0.17
Col6a2Q02788 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.97□□□□□ -0.17
Col6a2Q02788 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.97□□□□□ -0.17
Col6a2Q02788 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.97□□□□□ -0.17
Col6a2Q02788 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col6a2Q02788 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.96□□□□□ -0.17
Col6a2Q02788 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col6a2Q02788 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.96□□□□□ -0.17
Col6a2Q02788 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col6a2Q02788 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Col6a2Q02788 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a2Q02788 Gm12134-201ENSMUST00000122109 520 ntBASIC13.96□□□□□ -0.17
Col6a2Q02788 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.96□□□□□ -0.17
Col6a2Q02788 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms