Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarcc1P97496 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Smarcc1P97496 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcc1P97496 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Smarcc1P97496 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smarcc1P97496 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smarcc1P97496 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smarcc1P97496 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.46■□□□□ 0.39
Smarcc1P97496 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Gm6152-201ENSMUST00000151704 340 ntBASIC17.46■□□□□ 0.39
Smarcc1P97496 Proscos-202ENSMUST00000178990 666 ntBASIC17.46■□□□□ 0.39
Smarcc1P97496 Gm42550-201ENSMUST00000201553 960 ntBASIC17.46■□□□□ 0.39
Smarcc1P97496 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.46■□□□□ 0.39
Smarcc1P97496 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Smarcc1P97496 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Smarcc1P97496 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcc1P97496 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Smarcc1P97496 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Smarcc1P97496 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smarcc1P97496 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smarcc1P97496 Gm27243-201ENSMUST00000183964 521 ntBASIC17.45■□□□□ 0.38
Smarcc1P97496 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.45■□□□□ 0.38
Smarcc1P97496 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.45■□□□□ 0.38
Smarcc1P97496 Gm29705-201ENSMUST00000212598 474 ntBASIC17.45■□□□□ 0.38
Smarcc1P97496 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.45■□□□□ 0.38
Smarcc1P97496 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.45■□□□□ 0.38
Smarcc1P97496 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.45■□□□□ 0.38
Smarcc1P97496 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcc1P97496 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcc1P97496 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smarcc1P97496 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.44■□□□□ 0.38
Smarcc1P97496 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.44■□□□□ 0.38
Smarcc1P97496 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.44■□□□□ 0.38
Smarcc1P97496 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.44■□□□□ 0.38
Smarcc1P97496 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Smarcc1P97496 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.44■□□□□ 0.38
Smarcc1P97496 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Smarcc1P97496 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcc1P97496 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smarcc1P97496 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcc1P97496 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smarcc1P97496 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarcc1P97496 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.43■□□□□ 0.38
Smarcc1P97496 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms