Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SgcbP82349 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
SgcbP82349 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SgcbP82349 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SgcbP82349 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SgcbP82349 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SgcbP82349 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SgcbP82349 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.51□□□□□ -0.41
SgcbP82349 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.51□□□□□ -0.41
SgcbP82349 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.51□□□□□ -0.41
SgcbP82349 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.51□□□□□ -0.41
SgcbP82349 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SgcbP82349 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.51□□□□□ -0.41
SgcbP82349 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.51□□□□□ -0.41
SgcbP82349 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SgcbP82349 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.5□□□□□ -0.41
SgcbP82349 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
SgcbP82349 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.5□□□□□ -0.41
SgcbP82349 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.5□□□□□ -0.41
SgcbP82349 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SgcbP82349 Mir6977-201ENSMUST00000184960 64 ntBASIC12.5□□□□□ -0.41
SgcbP82349 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.5□□□□□ -0.41
SgcbP82349 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SgcbP82349 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SgcbP82349 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.5□□□□□ -0.41
SgcbP82349 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SgcbP82349 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.5□□□□□ -0.41
SgcbP82349 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.5□□□□□ -0.41
SgcbP82349 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SgcbP82349 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SgcbP82349 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.5□□□□□ -0.41
SgcbP82349 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SgcbP82349 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.49□□□□□ -0.41
SgcbP82349 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.49□□□□□ -0.41
SgcbP82349 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SgcbP82349 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SgcbP82349 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SgcbP82349 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SgcbP82349 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.49□□□□□ -0.41
SgcbP82349 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SgcbP82349 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SgcbP82349 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Gm20614-201ENSMUST00000177106 632 ntBASIC12.49□□□□□ -0.41
SgcbP82349 Gm27838-201ENSMUST00000184829 128 ntBASIC12.49□□□□□ -0.41
SgcbP82349 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.49□□□□□ -0.41
SgcbP82349 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms