Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Msx3P70354 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.44□□□□□ -0.1
Msx3P70354 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.44□□□□□ -0.1
Msx3P70354 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.44□□□□□ -0.1
Msx3P70354 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.44□□□□□ -0.1
Msx3P70354 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Msx3P70354 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.44□□□□□ -0.1
Msx3P70354 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msx3P70354 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.43□□□□□ -0.1
Msx3P70354 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.43□□□□□ -0.1
Msx3P70354 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Msx3P70354 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.43□□□□□ -0.1
Msx3P70354 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Msx3P70354 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.43□□□□□ -0.1
Msx3P70354 Gm18027-201ENSMUST00000218947 619 ntBASIC14.43□□□□□ -0.1
Msx3P70354 Chchd1-203ENSMUST00000224633 557 ntBASIC14.43□□□□□ -0.1
Msx3P70354 Dupd1-202ENSMUST00000224735 548 ntBASIC14.43□□□□□ -0.1
Msx3P70354 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Msx3P70354 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.43□□□□□ -0.1
Msx3P70354 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Msx3P70354 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.43□□□□□ -0.1
Msx3P70354 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msx3P70354 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Msx3P70354 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Msx3P70354 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.42□□□□□ -0.1
Msx3P70354 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Msx3P70354 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.42□□□□□ -0.1
Msx3P70354 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Msx3P70354 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.41□□□□□ -0.1
Msx3P70354 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msx3P70354 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Msx3P70354 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Msx3P70354 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Msx3P70354 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.41□□□□□ -0.1
Msx3P70354 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.41□□□□□ -0.1
Msx3P70354 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.41□□□□□ -0.1
Msx3P70354 Gm37714-201ENSMUST00000194742 342 ntBASIC14.41□□□□□ -0.1
Msx3P70354 Gm7774-201ENSMUST00000200064 533 ntBASIC14.41□□□□□ -0.1
Msx3P70354 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Gm16476-201ENSMUST00000221544 139 ntBASIC14.41□□□□□ -0.1
Msx3P70354 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msx3P70354 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Msx3P70354 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Msx3P70354 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Msx3P70354 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms