Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Frat1P70339 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Frat1P70339 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Frat1P70339 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Frat1P70339 Gm27704-201ENSMUST00000185094 107 ntBASIC15.22■□□□□ 0.03
Frat1P70339 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Frat1P70339 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.22■□□□□ 0.03
Frat1P70339 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.22■□□□□ 0.03
Frat1P70339 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Frat1P70339 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Frat1P70339 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Frat1P70339 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Frat1P70339 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.22■□□□□ 0.03
Frat1P70339 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Frat1P70339 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Frat1P70339 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Frat1P70339 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.21■□□□□ 0.03
Frat1P70339 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.21■□□□□ 0.03
Frat1P70339 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Frat1P70339 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Gm45167-201ENSMUST00000208007 322 ntBASIC15.21■□□□□ 0.03
Frat1P70339 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.21■□□□□ 0.03
Frat1P70339 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.21■□□□□ 0.03
Frat1P70339 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Frat1P70339 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Frat1P70339 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Frat1P70339 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Frat1P70339 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Frat1P70339 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Frat1P70339 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Frat1P70339 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.2■□□□□ 0.02
Frat1P70339 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Frat1P70339 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Frat1P70339 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Frat1P70339 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Frat1P70339 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.2■□□□□ 0.02
Frat1P70339 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Frat1P70339 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Frat1P70339 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Frat1P70339 Gm6659-201ENSMUST00000174752 547 ntBASIC15.2■□□□□ 0.02
Frat1P70339 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Frat1P70339 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Frat1P70339 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.2■□□□□ 0.02
Frat1P70339 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Frat1P70339 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Frat1P70339 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Frat1P70339 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Frat1P70339 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.2■□□□□ 0.02
Frat1P70339 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Frat1P70339 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Frat1P70339 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Frat1P70339 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Frat1P70339 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.19■□□□□ 0.02
Frat1P70339 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Frat1P70339 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.19■□□□□ 0.02
Frat1P70339 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Frat1P70339 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.19■□□□□ 0.02
Frat1P70339 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Frat1P70339 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms