Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a1P61620 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Gm13365-201ENSMUST00000121188 973 ntBASIC12.38□□□□□ -0.43
Sec61a1P61620 Mir1895-201ENSMUST00000122615 79 ntBASIC12.38□□□□□ -0.43
Sec61a1P61620 Gm25925-201ENSMUST00000158314 306 ntBASIC12.38□□□□□ -0.43
Sec61a1P61620 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Gm45612-201ENSMUST00000211320 160 ntBASIC12.38□□□□□ -0.43
Sec61a1P61620 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.38□□□□□ -0.43
Sec61a1P61620 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.38□□□□□ -0.43
Sec61a1P61620 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.38□□□□□ -0.43
Sec61a1P61620 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a1P61620 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.37□□□□□ -0.43
Sec61a1P61620 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.37□□□□□ -0.43
Sec61a1P61620 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.37□□□□□ -0.43
Sec61a1P61620 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sec61a1P61620 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.36□□□□□ -0.43
Sec61a1P61620 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sec61a1P61620 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sec61a1P61620 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Sec61a1P61620 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sec61a1P61620 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.36□□□□□ -0.43
Sec61a1P61620 Gm14701-201ENSMUST00000117156 348 ntBASIC12.36□□□□□ -0.43
Sec61a1P61620 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.36□□□□□ -0.43
Sec61a1P61620 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Gm2272-201ENSMUST00000194903 582 ntBASIC12.36□□□□□ -0.43
Sec61a1P61620 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.36□□□□□ -0.43
Sec61a1P61620 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.36□□□□□ -0.43
Sec61a1P61620 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.36□□□□□ -0.43
Sec61a1P61620 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms