Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.26□□□□□ -0.29
Nup43P59235 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Nup43P59235 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Nup43P59235 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Gm15393-201ENSMUST00000120499 219 ntBASIC13.25□□□□□ -0.29
Nup43P59235 Gm12151-201ENSMUST00000121374 290 ntBASIC13.25□□□□□ -0.29
Nup43P59235 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Nup43P59235 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.25□□□□□ -0.29
Nup43P59235 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.25□□□□□ -0.29
Nup43P59235 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.25□□□□□ -0.29
Nup43P59235 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup43P59235 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup43P59235 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nup43P59235 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.25□□□□□ -0.29
Nup43P59235 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nup43P59235 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nup43P59235 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup43P59235 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nup43P59235 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nup43P59235 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Nup43P59235 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup43P59235 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.24□□□□□ -0.29
Nup43P59235 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Gm20949-201ENSMUST00000206478 952 ntBASIC13.24□□□□□ -0.29
Nup43P59235 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.24□□□□□ -0.29
Nup43P59235 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.24□□□□□ -0.29
Nup43P59235 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nup43P59235 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.24□□□□□ -0.29
Nup43P59235 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nup43P59235 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nup43P59235 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nup43P59235 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Nup43P59235 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup43P59235 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Nup43P59235 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms