Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ercc3P49135 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.65■□□□□ 0.26
Ercc3P49135 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.65■□□□□ 0.26
Ercc3P49135 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.65■□□□□ 0.26
Ercc3P49135 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.65■□□□□ 0.26
Ercc3P49135 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.65■□□□□ 0.26
Ercc3P49135 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ercc3P49135 Gm9229-201ENSMUST00000222777 126 ntBASIC16.65■□□□□ 0.26
Ercc3P49135 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ercc3P49135 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc3P49135 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ercc3P49135 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ercc3P49135 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.64■□□□□ 0.26
Ercc3P49135 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ercc3P49135 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ercc3P49135 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.64■□□□□ 0.25
Ercc3P49135 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ercc3P49135 Gm15653-201ENSMUST00000119247 907 ntBASIC16.64■□□□□ 0.25
Ercc3P49135 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ercc3P49135 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ercc3P49135 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Gm2423-201ENSMUST00000074863 733 ntBASIC16.64■□□□□ 0.25
Ercc3P49135 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ercc3P49135 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ercc3P49135 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.64■□□□□ 0.25
Ercc3P49135 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ercc3P49135 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ercc3P49135 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Ercc3P49135 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.63■□□□□ 0.25
Ercc3P49135 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.63■□□□□ 0.25
Ercc3P49135 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ercc3P49135 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ercc3P49135 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ercc3P49135 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Gm15460-201ENSMUST00000118147 391 ntBASIC16.63■□□□□ 0.25
Ercc3P49135 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.63■□□□□ 0.25
Ercc3P49135 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.63■□□□□ 0.25
Ercc3P49135 Gm33320-201ENSMUST00000192232 530 ntBASIC16.63■□□□□ 0.25
Ercc3P49135 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.63■□□□□ 0.25
Ercc3P49135 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.63■□□□□ 0.25
Ercc3P49135 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.63■□□□□ 0.25
Ercc3P49135 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.63■□□□□ 0.25
Ercc3P49135 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ercc3P49135 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ercc3P49135 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms