Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.68□□□□□ -0.38
Rfx3P48381 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Gm6736-201ENSMUST00000166583 948 ntBASIC12.68□□□□□ -0.38
Rfx3P48381 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rfx3P48381 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.68□□□□□ -0.38
Rfx3P48381 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rfx3P48381 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rfx3P48381 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rfx3P48381 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.68□□□□□ -0.38
Rfx3P48381 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx3P48381 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rfx3P48381 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rfx3P48381 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Rfx3P48381 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.67□□□□□ -0.38
Rfx3P48381 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.67□□□□□ -0.38
Rfx3P48381 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rfx3P48381 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.67□□□□□ -0.38
Rfx3P48381 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.67□□□□□ -0.38
Rfx3P48381 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.67□□□□□ -0.38
Rfx3P48381 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.67□□□□□ -0.38
Rfx3P48381 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.67□□□□□ -0.38
Rfx3P48381 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Gm18057-201ENSMUST00000208220 503 ntBASIC12.67□□□□□ -0.38
Rfx3P48381 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.67□□□□□ -0.38
Rfx3P48381 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Gm10175-201ENSMUST00000086013 645 ntBASIC12.67□□□□□ -0.38
Rfx3P48381 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rfx3P48381 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx3P48381 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rfx3P48381 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.66□□□□□ -0.38
Rfx3P48381 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.66□□□□□ -0.38
Rfx3P48381 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfx3P48381 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rfx3P48381 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Rfx3P48381 Gm11594-201ENSMUST00000122313 162 ntBASIC12.66□□□□□ -0.38
Rfx3P48381 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Gm45612-201ENSMUST00000211320 160 ntBASIC12.66□□□□□ -0.38
Rfx3P48381 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.66□□□□□ -0.38
Rfx3P48381 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.66□□□□□ -0.38
Rfx3P48381 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx3P48381 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Rfx3P48381 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms