Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nedd4P46935 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nedd4P46935 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nedd4P46935 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.77■□□□□ 0.27
Nedd4P46935 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nedd4P46935 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nedd4P46935 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nedd4P46935 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.76■□□□□ 0.27
Nedd4P46935 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Nedd4P46935 Gm27341-201ENSMUST00000183570 106 ntBASIC16.76■□□□□ 0.27
Nedd4P46935 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.76■□□□□ 0.27
Nedd4P46935 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Nedd4P46935 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.76■□□□□ 0.27
Nedd4P46935 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nedd4P46935 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nedd4P46935 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nedd4P46935 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.76■□□□□ 0.27
Nedd4P46935 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nedd4P46935 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nedd4P46935 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.75■□□□□ 0.27
Nedd4P46935 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.75■□□□□ 0.27
Nedd4P46935 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nedd4P46935 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nedd4P46935 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nedd4P46935 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nedd4P46935 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nedd4P46935 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nedd4P46935 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nedd4P46935 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.75■□□□□ 0.27
Nedd4P46935 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.75■□□□□ 0.27
Nedd4P46935 Rps4l-202ENSMUST00000204242 789 ntBASIC16.75■□□□□ 0.27
Nedd4P46935 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.75■□□□□ 0.27
Nedd4P46935 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.75■□□□□ 0.27
Nedd4P46935 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nedd4P46935 Gm5161-201ENSMUST00000075243 853 ntBASIC16.75■□□□□ 0.27
Nedd4P46935 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nedd4P46935 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nedd4P46935 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Nedd4P46935 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.75■□□□□ 0.27
Nedd4P46935 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nedd4P46935 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Nedd4P46935 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Gm13369-201ENSMUST00000119442 987 ntBASIC16.74■□□□□ 0.27
Nedd4P46935 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.74■□□□□ 0.27
Nedd4P46935 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Nedd4P46935 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Nedd4P46935 Gm16505-201ENSMUST00000179981 232 ntBASIC16.74■□□□□ 0.27
Nedd4P46935 Gm6621-201ENSMUST00000193251 772 ntBASIC16.74■□□□□ 0.27
Nedd4P46935 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.74■□□□□ 0.27
Nedd4P46935 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Mir497b-201ENSMUST00000093601 125 ntBASIC16.74■□□□□ 0.27
Nedd4P46935 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nedd4P46935 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nedd4P46935 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nedd4P46935 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nedd4P46935 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms