Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.54□□□□□ -0.24
Tnfsf4P43488 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf4P43488 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Gm18057-201ENSMUST00000208220 503 ntBASIC13.53□□□□□ -0.24
Tnfsf4P43488 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.53□□□□□ -0.24
Tnfsf4P43488 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.53□□□□□ -0.24
Tnfsf4P43488 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.53□□□□□ -0.24
Tnfsf4P43488 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf4P43488 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.52□□□□□ -0.24
Tnfsf4P43488 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Tnfsf4P43488 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Tnfsf4P43488 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Tnfsf4P43488 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Tnfsf4P43488 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf4P43488 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf4P43488 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf4P43488 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf4P43488 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf4P43488 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm29310-201ENSMUST00000185468 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21825-201ENSMUST00000185728 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm29109-201ENSMUST00000185895 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21896-201ENSMUST00000186520 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21873-201ENSMUST00000186728 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21794-201ENSMUST00000187056 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21880-201ENSMUST00000187275 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21826-201ENSMUST00000187451 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21198-201ENSMUST00000188393 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21749-201ENSMUST00000189343 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21901-201ENSMUST00000189568 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm29424-201ENSMUST00000189716 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm28599-201ENSMUST00000189838 694 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21867-201ENSMUST00000189917 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm29269-201ENSMUST00000190087 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21722-201ENSMUST00000190153 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm28423-201ENSMUST00000190701 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21899-201ENSMUST00000190745 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21910-201ENSMUST00000191163 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21849-201ENSMUST00000191571 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm28678-201ENSMUST00000191593 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm20910-201ENSMUST00000193268 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm21871-201ENSMUST00000194621 696 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.52□□□□□ -0.25
Tnfsf4P43488 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms