Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.27□□□□□ -0.29
Cdx2P43241 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.27□□□□□ -0.29
Cdx2P43241 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdx2P43241 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cdx2P43241 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cdx2P43241 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cdx2P43241 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.27□□□□□ -0.29
Cdx2P43241 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdx2P43241 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdx2P43241 Gm11803-201ENSMUST00000119966 444 ntBASIC13.26□□□□□ -0.29
Cdx2P43241 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Cdx2P43241 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdx2P43241 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Cdx2P43241 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdx2P43241 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cdx2P43241 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Cdx2P43241 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Cdx2P43241 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdx2P43241 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Cdx2P43241 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx2P43241 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdx2P43241 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdx2P43241 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdx2P43241 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Cdx2P43241 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.25□□□□□ -0.29
Cdx2P43241 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdx2P43241 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.25□□□□□ -0.29
Cdx2P43241 Gm16177-201ENSMUST00000120728 718 ntBASIC13.25□□□□□ -0.29
Cdx2P43241 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Cdx2P43241 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdx2P43241 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.25□□□□□ -0.29
Cdx2P43241 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdx2P43241 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.25□□□□□ -0.29
Cdx2P43241 Gm7399-201ENSMUST00000032395 858 ntBASIC13.25□□□□□ -0.29
Cdx2P43241 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdx2P43241 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.25□□□□□ -0.29
Cdx2P43241 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdx2P43241 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx2P43241 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms