Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Mmp13P33435 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.36□□□□□ -0.11
Mmp13P33435 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.36□□□□□ -0.11
Mmp13P33435 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.36□□□□□ -0.11
Mmp13P33435 Gm24158-201ENSMUST00000175263 71 ntBASIC14.36□□□□□ -0.11
Mmp13P33435 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.36□□□□□ -0.11
Mmp13P33435 Gm27920-201ENSMUST00000183953 96 ntBASIC14.36□□□□□ -0.11
Mmp13P33435 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.36□□□□□ -0.11
Mmp13P33435 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.36□□□□□ -0.11
Mmp13P33435 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.36□□□□□ -0.11
Mmp13P33435 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.36□□□□□ -0.11
Mmp13P33435 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.36□□□□□ -0.11
Mmp13P33435 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Mmp13P33435 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.36□□□□□ -0.11
Mmp13P33435 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.36□□□□□ -0.11
Mmp13P33435 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Mmp13P33435 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Mmp13P33435 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.36□□□□□ -0.11
Mmp13P33435 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp13P33435 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp13P33435 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp13P33435 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Mmp13P33435 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.35□□□□□ -0.11
Mmp13P33435 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.35□□□□□ -0.11
Mmp13P33435 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.35□□□□□ -0.11
Mmp13P33435 Gm38225-201ENSMUST00000194001 393 ntBASIC14.35□□□□□ -0.11
Mmp13P33435 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Mmp13P33435 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Mmp13P33435 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.35□□□□□ -0.11
Mmp13P33435 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp13P33435 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Mmp13P33435 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp13P33435 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Mmp13P33435 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Mmp13P33435 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Mmp13P33435 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp13P33435 Gm7774-201ENSMUST00000200064 533 ntBASIC14.34□□□□□ -0.11
Mmp13P33435 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.34□□□□□ -0.11
Mmp13P33435 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.34□□□□□ -0.11
Mmp13P33435 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.34□□□□□ -0.11
Mmp13P33435 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Mmp13P33435 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.34□□□□□ -0.11
Mmp13P33435 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp13P33435 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Mmp13P33435 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp13P33435 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp13P33435 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp13P33435 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp13P33435 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms