Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccl3P10855 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl3P10855 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl3P10855 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Ccl3P10855 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl3P10855 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.33□□□□□ -0.43
Ccl3P10855 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl3P10855 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccl3P10855 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccl3P10855 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Mir698-201ENSMUST00000102164 109 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 Mir1247-201ENSMUST00000116706 82 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 Gm15198-201ENSMUST00000117283 177 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccl3P10855 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccl3P10855 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 Gm27572-201ENSMUST00000183702 255 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccl3P10855 Gm18473-201ENSMUST00000220543 868 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.33□□□□□ -0.44
Ccl3P10855 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccl3P10855 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccl3P10855 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccl3P10855 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccl3P10855 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccl3P10855 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Gm12384-201ENSMUST00000119228 919 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Gm11803-201ENSMUST00000119966 444 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccl3P10855 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccl3P10855 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccl3P10855 Gm22331-201ENSMUST00000158066 136 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Gm5370-201ENSMUST00000187187 574 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Gm43818-201ENSMUST00000200605 466 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Gm42550-201ENSMUST00000201553 960 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccl3P10855 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccl3P10855 Olfr582-201ENSMUST00000098212 960 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccl3P10855 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Ccl3P10855 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.32□□□□□ -0.44
Ccl3P10855 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccl3P10855 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ccl3P10855 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms