Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CfdP03953 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.72□□□□□ -0.53
CfdP03953 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.72□□□□□ -0.53
CfdP03953 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CfdP03953 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CfdP03953 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CfdP03953 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.72□□□□□ -0.53
CfdP03953 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.72□□□□□ -0.53
CfdP03953 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CfdP03953 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.72□□□□□ -0.53
CfdP03953 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.72□□□□□ -0.53
CfdP03953 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CfdP03953 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.72□□□□□ -0.53
CfdP03953 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CfdP03953 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.72□□□□□ -0.53
CfdP03953 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.71□□□□□ -0.53
CfdP03953 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CfdP03953 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
CfdP03953 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.71□□□□□ -0.53
CfdP03953 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CfdP03953 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.71□□□□□ -0.53
CfdP03953 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.71□□□□□ -0.53
CfdP03953 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
CfdP03953 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.71□□□□□ -0.53
CfdP03953 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
CfdP03953 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CfdP03953 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.71□□□□□ -0.53
CfdP03953 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.71□□□□□ -0.53
CfdP03953 Gm7977-201ENSMUST00000193787 748 ntBASIC11.71□□□□□ -0.53
CfdP03953 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CfdP03953 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.71□□□□□ -0.53
CfdP03953 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CfdP03953 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CfdP03953 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CfdP03953 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CfdP03953 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CfdP03953 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.71□□□□□ -0.54
CfdP03953 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CfdP03953 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CfdP03953 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CfdP03953 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CfdP03953 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
CfdP03953 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.7□□□□□ -0.54
CfdP03953 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
CfdP03953 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CfdP03953 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.7□□□□□ -0.54
CfdP03953 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.7□□□□□ -0.54
CfdP03953 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms