Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.72□□□□□ -0.37
Lmx1bO88609 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.72□□□□□ -0.37
Lmx1bO88609 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Lmx1bO88609 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmx1bO88609 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lmx1bO88609 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.71□□□□□ -0.37
Lmx1bO88609 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.71□□□□□ -0.37
Lmx1bO88609 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.71□□□□□ -0.37
Lmx1bO88609 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.71□□□□□ -0.37
Lmx1bO88609 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.71□□□□□ -0.37
Lmx1bO88609 Gm33320-201ENSMUST00000192232 530 ntBASIC12.71□□□□□ -0.37
Lmx1bO88609 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmx1bO88609 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.71□□□□□ -0.38
Lmx1bO88609 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmx1bO88609 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmx1bO88609 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lmx1bO88609 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmx1bO88609 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Lmx1bO88609 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmx1bO88609 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lmx1bO88609 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmx1bO88609 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Lmx1bO88609 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.7□□□□□ -0.38
Lmx1bO88609 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lmx1bO88609 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lmx1bO88609 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Lmx1bO88609 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lmx1bO88609 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Gm14042-201ENSMUST00000120139 833 ntBASIC12.7□□□□□ -0.38
Lmx1bO88609 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.7□□□□□ -0.38
Lmx1bO88609 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.7□□□□□ -0.38
Lmx1bO88609 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.7□□□□□ -0.38
Lmx1bO88609 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.7□□□□□ -0.38
Lmx1bO88609 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmx1bO88609 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.7□□□□□ -0.38
Lmx1bO88609 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms