Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nr1i3O35627 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Nr1i3O35627 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.06■□□□□ 0
Nr1i3O35627 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Matn2-206ENSMUST00000228570 2798 ntBASIC15.06■□□□□ 0
Nr1i3O35627 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.06■□□□□ 0
Nr1i3O35627 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nr1i3O35627 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nr1i3O35627 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.06■□□□□ 0
Nr1i3O35627 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Nr1i3O35627 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nr1i3O35627 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nr1i3O35627 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1i3O35627 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Nr1i3O35627 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nr1i3O35627 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nr1i3O35627 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nr1i3O35627 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.05■□□□□ 0
Nr1i3O35627 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.05■□□□□ -0
Nr1i3O35627 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Nr1i3O35627 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.05■□□□□ -0
Nr1i3O35627 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Nr1i3O35627 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.05■□□□□ -0
Nr1i3O35627 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.05■□□□□ -0
Nr1i3O35627 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Gm37714-201ENSMUST00000194742 342 ntBASIC15.05■□□□□ -0
Nr1i3O35627 Gm43125-201ENSMUST00000201724 730 ntBASIC15.05■□□□□ -0
Nr1i3O35627 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Nr1i3O35627 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Nr1i3O35627 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.05■□□□□ -0
Nr1i3O35627 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.05■□□□□ -0
Nr1i3O35627 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Nr1i3O35627 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Nr1i3O35627 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1i3O35627 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Nr1i3O35627 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.04■□□□□ -0
Nr1i3O35627 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Nr1i3O35627 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.04■□□□□ -0
Nr1i3O35627 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.04■□□□□ -0
Nr1i3O35627 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nr1i3O35627 Gm22065-201ENSMUST00000103753 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm22066-201ENSMUST00000103761 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm24932-201ENSMUST00000103763 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm24115-201ENSMUST00000103799 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm22190-201ENSMUST00000103827 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm22191-201ENSMUST00000103831 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm24721-201ENSMUST00000103849 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm28018-201ENSMUST00000103869 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm26399-201ENSMUST00000103937 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nr1i3O35627 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nr1i3O35627 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.04■□□□□ -0
Nr1i3O35627 Gm25349-201ENSMUST00000177728 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm23616-201ENSMUST00000177797 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm25871-201ENSMUST00000177816 110 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms