Protein–RNA interactions for Protein: F6U8B9

Gm17555, Predicted gene, 17555, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17555F6U8B9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Gm27397-201ENSMUST00000184997 107 ntBASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.99□□□□□ -0.33
Gm17555F6U8B9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm17555F6U8B9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Gm15427-201ENSMUST00000117288 531 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Gm17271-201ENSMUST00000165535 355 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Gm24513-201ENSMUST00000174964 138 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Gm27702-201ENSMUST00000184512 56 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Gm2756-201ENSMUST00000195851 400 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Gm44492-201ENSMUST00000197012 141 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.98□□□□□ -0.33
Gm17555F6U8B9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm17555F6U8B9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms