Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm28043E0CXC2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Gm28043E0CXC2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm28043E0CXC2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm28043E0CXC2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.08□□□□□ -0.15
Gm28043E0CXC2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm28043E0CXC2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.08□□□□□ -0.15
Gm28043E0CXC2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm28043E0CXC2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm28043E0CXC2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.08□□□□□ -0.16
Gm28043E0CXC2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.08□□□□□ -0.16
Gm28043E0CXC2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Gm11594-201ENSMUST00000122313 162 ntBASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.07□□□□□ -0.16
Gm28043E0CXC2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28043E0CXC2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms