Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.79□□□□□ -0.68
PdfS4R2K0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PdfS4R2K0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.78□□□□□ -0.68
PdfS4R2K0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.78□□□□□ -0.68
PdfS4R2K0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Gm13036-201ENSMUST00000117799 748 ntBASIC10.78□□□□□ -0.68
PdfS4R2K0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.78□□□□□ -0.68
PdfS4R2K0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.78□□□□□ -0.68
PdfS4R2K0 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.78□□□□□ -0.68
PdfS4R2K0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.78□□□□□ -0.68
PdfS4R2K0 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.78□□□□□ -0.68
PdfS4R2K0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.78□□□□□ -0.68
PdfS4R2K0 Psmb5-202ENSMUST00000227257 622 ntBASIC10.78□□□□□ -0.68
PdfS4R2K0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PdfS4R2K0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.78□□□□□ -0.68
PdfS4R2K0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
PdfS4R2K0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
PdfS4R2K0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PdfS4R2K0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PdfS4R2K0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PdfS4R2K0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
PdfS4R2K0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
PdfS4R2K0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PdfS4R2K0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
PdfS4R2K0 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.77□□□□□ -0.68
PdfS4R2K0 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.77□□□□□ -0.68
PdfS4R2K0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PdfS4R2K0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
PdfS4R2K0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.77□□□□□ -0.69
PdfS4R2K0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.77□□□□□ -0.69
PdfS4R2K0 Gm37153-201ENSMUST00000193637 231 ntBASIC10.77□□□□□ -0.69
PdfS4R2K0 Gm7787-201ENSMUST00000216858 688 ntBASIC10.77□□□□□ -0.69
PdfS4R2K0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
PdfS4R2K0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
PdfS4R2K0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
PdfS4R2K0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.77□□□□□ -0.69
PdfS4R2K0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
PdfS4R2K0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
PdfS4R2K0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.76□□□□□ -0.69
PdfS4R2K0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
PdfS4R2K0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
PdfS4R2K0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.76□□□□□ -0.69
PdfS4R2K0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms