Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcb1Q9Z0H3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Gm12134-201ENSMUST00000122109 520 ntBASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Gm43094-201ENSMUST00000196549 921 ntBASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.53□□□□□ -0.08
Smarcb1Q9Z0H3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Smarcb1Q9Z0H3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcb1Q9Z0H3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcb1Q9Z0H3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcb1Q9Z0H3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.52□□□□□ -0.08
Smarcb1Q9Z0H3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcb1Q9Z0H3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcb1Q9Z0H3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.52□□□□□ -0.08
Smarcb1Q9Z0H3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smarcb1Q9Z0H3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Smarcb1Q9Z0H3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcb1Q9Z0H3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms