Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Gm15321-201ENSMUST00000121290 288 ntBASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Gm9522-201ENSMUST00000182394 926 ntBASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Gm20949-201ENSMUST00000206478 952 ntBASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.23□□□□□ -0.13
Tubd1Q9R1K7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Gm22189-201ENSMUST00000103822 86 ntBASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Gm18905-201ENSMUST00000205454 928 ntBASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubd1Q9R1K7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Auts2-212ENSMUST00000178555 309 ntBASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Tubd1Q9R1K7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubd1Q9R1K7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubd1Q9R1K7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms