Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp5Q9D7S9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Rpph1-201ENSMUST00000175096 319 ntBASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Gm2651-201ENSMUST00000203560 838 ntBASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Gm38094-201ENSMUST00000195864 2978 ntBASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp5Q9D7S9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Gm14140-201ENSMUST00000119999 995 ntBASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp5Q9D7S9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Chmp5Q9D7S9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms