Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Gm8410-201ENSMUST00000117225 605 ntBASIC13.71□□□□□ -0.21
Msh4Q99MT2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Gm18766-201ENSMUST00000189811 808 ntBASIC13.71□□□□□ -0.21
Msh4Q99MT2 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.71□□□□□ -0.21
Msh4Q99MT2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Msh4Q99MT2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Msh4Q99MT2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Msh4Q99MT2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Msh4Q99MT2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Msh4Q99MT2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Msh4Q99MT2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Msh4Q99MT2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Msh4Q99MT2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Msh4Q99MT2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.7□□□□□ -0.22
Msh4Q99MT2 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.7□□□□□ -0.22
Msh4Q99MT2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.7□□□□□ -0.22
Msh4Q99MT2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Acot6-202ENSMUST00000222921 3622 ntBASIC13.69□□□□□ -0.22
Msh4Q99MT2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Gm27618-201ENSMUST00000183671 60 ntBASIC13.69□□□□□ -0.22
Msh4Q99MT2 Gm27622-201ENSMUST00000183779 60 ntBASIC13.69□□□□□ -0.22
Msh4Q99MT2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Gm37230-201ENSMUST00000194491 818 ntBASIC13.69□□□□□ -0.22
Msh4Q99MT2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.69□□□□□ -0.22
Msh4Q99MT2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Msh4Q99MT2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms