Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cstf1Q99LC2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Gm12928-201ENSMUST00000117115 573 ntBASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Gm8463-201ENSMUST00000208573 613 ntBASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.02□□□□□ -0.17
Cstf1Q99LC2 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cstf1Q99LC2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.01□□□□□ -0.17
Cstf1Q99LC2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm5425-201ENSMUST00000214125 459 ntBASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm7399-201ENSMUST00000032395 858 ntBASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cstf1Q99LC2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Cstf1Q99LC2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cstf1Q99LC2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cstf1Q99LC2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cstf1Q99LC2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms