Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp11Q99K46 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.84□□□□□ -0.03
Usp11Q99K46 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.84□□□□□ -0.03
Usp11Q99K46 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp11Q99K46 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp11Q99K46 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Usp11Q99K46 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.83□□□□□ -0.03
Usp11Q99K46 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp11Q99K46 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp11Q99K46 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Gm25287-201ENSMUST00000103846 110 ntBASIC14.83□□□□□ -0.04
Usp11Q99K46 Gm22918-201ENSMUST00000103855 110 ntBASIC14.83□□□□□ -0.04
Usp11Q99K46 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Gm38225-201ENSMUST00000194001 393 ntBASIC14.83□□□□□ -0.04
Usp11Q99K46 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Olfr286-202ENSMUST00000205305 969 ntBASIC14.83□□□□□ -0.04
Usp11Q99K46 Gm45098-201ENSMUST00000207179 657 ntBASIC14.83□□□□□ -0.04
Usp11Q99K46 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.83□□□□□ -0.04
Usp11Q99K46 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp11Q99K46 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Usp11Q99K46 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Usp11Q99K46 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp11Q99K46 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Usp11Q99K46 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Usp11Q99K46 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Usp11Q99K46 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Usp11Q99K46 Gm14701-201ENSMUST00000117156 348 ntBASIC14.82□□□□□ -0.04
Usp11Q99K46 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp11Q99K46 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Gm5312-201ENSMUST00000203728 547 ntBASIC14.82□□□□□ -0.04
Usp11Q99K46 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Usp11Q99K46 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp11Q99K46 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp11Q99K46 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.81□□□□□ -0.04
Usp11Q99K46 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Usp11Q99K46 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp11Q99K46 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Usp11Q99K46 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.8□□□□□ -0.04
Usp11Q99K46 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Usp11Q99K46 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms