Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Usp3Q91W36 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp3Q91W36 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp3Q91W36 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp3Q91W36 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Usp3Q91W36 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.46□□□□□ -0.1
Usp3Q91W36 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp3Q91W36 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Usp3Q91W36 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp3Q91W36 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp3Q91W36 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Gm6218-201ENSMUST00000219812 628 ntBASIC14.45□□□□□ -0.1
Usp3Q91W36 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Gm9797-201ENSMUST00000052902 613 ntBASIC14.45□□□□□ -0.1
Usp3Q91W36 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.45□□□□□ -0.1
Usp3Q91W36 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp3Q91W36 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp3Q91W36 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Usp3Q91W36 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.44□□□□□ -0.1
Usp3Q91W36 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp3Q91W36 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp3Q91W36 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp3Q91W36 Gm7063-201ENSMUST00000186840 981 ntBASIC14.44□□□□□ -0.1
Usp3Q91W36 Gm42612-201ENSMUST00000197986 623 ntBASIC14.44□□□□□ -0.1
Usp3Q91W36 Gm43170-201ENSMUST00000199827 612 ntBASIC14.44□□□□□ -0.1
Usp3Q91W36 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.44□□□□□ -0.1
Usp3Q91W36 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp3Q91W36 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp3Q91W36 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp3Q91W36 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp3Q91W36 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp3Q91W36 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp3Q91W36 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Usp3Q91W36 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp3Q91W36 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp3Q91W36 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp3Q91W36 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp3Q91W36 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp3Q91W36 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Usp3Q91W36 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms