Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc58Q8R3Q6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Gm6550-201ENSMUST00000187574 993 ntBASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc58Q8R3Q6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Gm4899-201ENSMUST00000178708 719 ntBASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Rps4l-201ENSMUST00000071745 943 ntBASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc58Q8R3Q6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms