Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Gm33142-201ENSMUST00000193913 867 ntBASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf4Q8K4J2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ebf4Q8K4J2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.78□□□□□ -0.36
Ebf4Q8K4J2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms